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Intron Name: Anas_platyrhynchos_platyrhynchos_15_924917_925185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

924917 - 925185

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

GCCACCAGGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

-0.2

1.4

53.5

Major PPT

84.9

0.78

0.8

76.9

37.4

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

45.3

-0.2

1.8

58.67

Associated Gene:

Gene:

AQP8

Ensembl Gene ID:

ENSAPLG00000028536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034224

916745 - 925694

8950