Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_9350386_9350662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9350386 - 9350662

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTAGG

5'SS Class:

major

3'SS Sequence:

TGCGGCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TAGTTACTAATA

Flanking Amino Acid:

RCSLSHAITLEFYQDGNGPE

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

65.6

45.7

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

0.41

60.2

40.5

Minor 5ss

34.2

-1.8

2.9

39.3

41.1

Minor BPS

48.6

-0.1

1.9

62.09

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010599

9334618 - 9360915

26298