Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_9351748_9352615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9351748 - 9352615

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

CTTTTCTGCACA

Flanking Amino Acid:

ASVSGKISCLDACGDLMVTL

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

68.8

43.8

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

79.8

0.67

0.9

75.7

32.9

Minor 5ss

37.2

-1.4

46.7

48.6

Minor BPS

55.6

0.17

1.9

71.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010599

9334618 - 9360915

26298