Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_9368026_9369106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9368026 - 9369106

Intron Length:

1081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

AATACCATAAGT

Flanking Amino Acid:

IIICFVFLWQLLGPSALTSV

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

76.2

0.59

0.9

72.3

32.5

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

53.6

0.19

73.86

42.2

Associated Gene:

Gene:

ABCC6

Ensembl Gene ID:

ENSAPLG00000009046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009507

9362054 - 9384307

22254