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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9392234_9393157_R


Intron Information:

Intron Rank:
28

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9392234 - 9393157

Intron Length:
924

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTGTG

5'SS Class:
strong_major

3'SS Sequence:
TTTTTATGACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATGACCA

Flanking Amino Acid:
LRFKITIIPQDPILFSGSLR

Intron Amino Acid Position:
1363

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.1
0.85
0.9
76.2
39.9

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
76.3
0.59
1
71.2
43.2

Minor 5ss
34.9
-1.7
3.5
48.2
47.9

Minor BPS
51.8
0.05
2
73.1
38.5

Associated Gene:

Gene:
ABCC1

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9389664 - 9432903
43240