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Intron Name: Anas_platyrhynchos_platyrhynchos_15_939370_940147_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

939370 - 940147

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTACCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CATTCTCTACCT

Flanking Amino Acid:

PVAMFINYEQVNMTDRFGQI

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

57.4

0.17

1.7

70.2

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

52.3

0.15

73.45

43.5

Associated Gene:

Gene:

LCMT1

Ensembl Gene ID:

ENSAPLG00000010710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011202

935379 - 941934

6556