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Intron Name: Anas_platyrhynchos_platyrhynchos_15_940269_941752_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

940269 - 941752

Intron Length:

1484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGTTT

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTAAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTGAT

U12 Branch Point Sequence:

TTTGTTTTAAAG

Flanking Amino Acid:

EKLKKHNLDVHLPTLLIAEC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

73.6

37.9

Major BPS

55.7

0.14

1.4

49.1

46.3

Major PPT

0.7

82.2

33.3

Minor 5ss

44.9

-0.6

3.4

70.1

41.4

Minor BPS

62.1

0.24

1.6

67.62

40.4

Associated Gene:

Gene:

LCMT1

Ensembl Gene ID:

ENSAPLG00000010710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011202

935379 - 941934

6556