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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9411068_9411974_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9411068 - 9411974

Intron Length:
907

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGAATT

5'SS Class:
strong_major

3'SS Sequence:
ACTTTAATTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
TACACTTTAATT

Flanking Amino Acid:
WSRNDPPSLNSINFTVPEGS

Intron Amino Acid Position:
653

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
95
1.06
0.7
93.7
19.9

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
78.8
0.65
0.9
75.1
38.1

Minor 5ss
39.4
-1.2
3.1
57.6
46.6

Minor BPS
70
0.71
1.3
77.57
39.2

Associated Gene:

Gene:
ABCC1

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9389664 - 9432903
43240