Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_9502957_9503770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9502957 - 9503770

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCACT

5'SS Class:

major

3'SS Sequence:

ATGTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATA

Flanking Amino Acid:

KEEELQAALARLEDETSQKN

Intron Amino Acid Position:

1104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.9

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.1

0.77

0.8

81.6

35.5

Minor 5ss

48.2

-0.2

2.5

67.7

42.9

Minor BPS

0.69

1.1

73.84

31.5

Associated Gene:

Gene:

MYH11

Ensembl Gene ID:

ENSAPLG00000006168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006591

9463919 - 9517380

53462