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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9524075_9525022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9524075 - 9525022

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTCCTTTATC

Flanking Amino Acid:

NMATPATFRRGFEDSYSATP

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

77.7

32.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.3

0.59

0.8

69.4

31.3

Minor 5ss

27.8

-2.5

3.3

39.7

46.3

Minor BPS

71.5

0.66

1.6

78.41

37.7

Associated Gene:

Gene:

NDE1

Ensembl Gene ID:

ENSAPLG00000005964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006217

9521821 - 9531575

9755