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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9526844_9530325_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9526844 - 9530325

Intron Length:

3482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CACTGTTTAATT

Flanking Amino Acid:

RLRMELESVKEKIEIQHSEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

78.9

35.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

73.2

0.52

0.9

68.6

37.3

Minor 5ss

-1.8

3.5

46.6

48.7

Minor BPS

55.9

0.26

1.8

68.01

43.8

Associated Gene:

Gene:

NDE1

Ensembl Gene ID:

ENSAPLG00000005964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006217

9521821 - 9531575

9755