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Intron Name: Anas_platyrhynchos_platyrhynchos_15_95270_96561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95270 - 96561

Intron Length:

1292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

ATTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

GCGCTTTGAATT

Flanking Amino Acid:

EGDGRAHYALVNLAETEITK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

77.3

37.6

Major BPS

74.6

0.61

1.4

34.5

Major PPT

88.8

0.87

0.7

85.4

28.5

Minor 5ss

41.2

-1

2.8

53.2

38.8

Minor BPS

48.6

-0

1.4

58.07

39.5

Associated Gene:

Gene:

NSMCE1

Ensembl Gene ID:

ENSAPLG00000015098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015761

93912 - 100687

6776