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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9530480_9531489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9530480 - 9531489

Intron Length:

1010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

AATTGCCTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCATTATGA

Flanking Amino Acid:

WKELAMKYKQCAENTQEELR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

67.6

39.2

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

71.6

0.49

0.9

67.4

39.3

Minor 5ss

30.2

-2.3

3.2

35.2

42.4

Minor BPS

50.5

0.01

2.1

69.42

42.6

Associated Gene:

Gene:

NDE1

Ensembl Gene ID:

ENSAPLG00000005964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006217

9521821 - 9531575

9755