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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9553627_9553927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9553627 - 9553927

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

AGTTATATATCT

Flanking Amino Acid:

VFKFTEIYEKKFGHKLIVSD

Intron Amino Acid Position:

740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

78.6

0.71

78.6

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

47.2

-0.1

69.33

41.1

Associated Gene:

Gene:

MARF1

Ensembl Gene ID:

ENSAPLG00000005447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026587

9541907 - 9558161

16255

ENSAPLT00000005697

9541907 - 9563318

21412