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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9554165_9554658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9554165 - 9554658

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGCTGT

5'SS Class:

major

3'SS Sequence:

CTTGTTATTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTGACTTTAACC

Flanking Amino Acid:

CKQHCLNKDFIEHEFDPDSY

Intron Amino Acid Position:

819

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

71.7

40.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.9

0.74

0.9

76.7

36.2

Minor 5ss

-0.2

2.9

69.1

41.8

Minor BPS

0.8

1.2

78.94

36.6

Associated Gene:

Gene:

MARF1

Ensembl Gene ID:

ENSAPLG00000005447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005697

9541907 - 9563318

21412

ENSAPLT00000026587

9541907 - 9558161

16255