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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9560044_9560139_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9560044 - 9560139

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TTTTTCCTAATA

Flanking Amino Acid:

LLKSLPYLVEVFTNGATEEY

Intron Amino Acid Position:

1196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

82.2

0.8

0.9

81.6

Major PPT

81.1

0.7

0.8

78.5

28.9

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

71.9

0.68

1.6

83.62

30.2

Associated Gene:

Gene:

MARF1

Ensembl Gene ID:

ENSAPLG00000005447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005697

9541907 - 9563318

21412