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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9561200_9561294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9561200 - 9561294

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

ACCAAATGAACT

Flanking Amino Acid:

RIVVLKNDMKTRFSSPSFPP

Intron Amino Acid Position:

1287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

84.6

33.2

Major BPS

58.9

0.22

49.8

35.1

Major PPT

80.6

0.69

0.8

76.4

32.2

Minor 5ss

-0.3

2.9

67.1

37.8

Minor BPS

44.5

-0.3

1.9

58.57

43.6

Associated Gene:

Gene:

MARF1

Ensembl Gene ID:

ENSAPLG00000005447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005697

9541907 - 9563318

21412