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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9561430_9562391_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9561430 - 9562391

Intron Length:

962

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTA|GCAATGGTA

5'SS Class:

weak_major

3'SS Sequence:

CTTATCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

GTTCTCTTATCT

Flanking Amino Acid:

SSMELSLGTPTSNQTEQELL

Intron Amino Acid Position:

1332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.3

63.3

38.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

81.9

0.72

0.8

77.2

31.4

Minor 5ss

24.4

-2.9

4.4

38.9

Minor BPS

66.4

0.59

1.6

82.05

39.1

Associated Gene:

Gene:

MARF1

Ensembl Gene ID:

ENSAPLG00000005447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005697

9541907 - 9563318

21412