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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9579485_9597191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9579485 - 9597191

Intron Length:

17707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CTGACGTTATTT

Flanking Amino Acid:

LVRRESELRFMMDDIQLCKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

87.3

Major BPS

0.62

1.4

85.7

34.9

Major PPT

85.6

0.8

80.7

31.4

Minor 5ss

42.7

-0.8

2.8

59.4

38.1

Minor BPS

45.8

-0.2

2.3

63.91

46.8

Associated Gene:

Gene:

BMERB1

Ensembl Gene ID:

ENSAPLG00000005401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030688

9576400 - 9621644

45245

ENSAPLT00000005579

9575207 - 9597277

22071