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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9645366_9646061_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9645366 - 9646061

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAAC

5'SS Class:

major

3'SS Sequence:

ACTGGTAACACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTTCCTCTCACT

Flanking Amino Acid:

RKDIPGPLQGSGQDMVSILQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

68.4

38.7

Major BPS

72.7

0.56

30.1

Major PPT

58.7

0.2

50.8

41.4

Minor 5ss

32.8

-2

3.1

41.6

45.4

Minor BPS

55.2

0.24

2.1

82.08

39.3

Associated Gene:

Gene:

PDXDC1

Ensembl Gene ID:

ENSAPLG00000005252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035080

9644859 - 9662185

17327

ENSAPLT00000019568

9644859 - 9656191

11333

ENSAPLT00000005464

9640870 - 9666500

25631