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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9652483_9653277_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9652483 - 9653277

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTTTCAACAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTTTCAACAAAG

Flanking Amino Acid:

KLPLLLVANAGTPGAGHTDK

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

56.9

0.16

1.1

56.9

36.9

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

44.3

-0.5

2.1

56.81

43.4

Associated Gene:

Gene:

PDXDC1

Ensembl Gene ID:

ENSAPLG00000005252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019568

9644859 - 9656191

11333

ENSAPLT00000005464

9640870 - 9666500

25631

ENSAPLT00000035080

9644859 - 9662185

17327