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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9653363_9654227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9653363 - 9654227

Intron Length:

865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGGAAC

5'SS Class:

major

3'SS Sequence:

TTTATTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

ACACACTTAATA

Flanking Amino Acid:

EQYNMWLHVEGVNLATLALG

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

65.7

40.1

Major BPS

79.4

0.73

80.1

Major PPT

88.2

0.86

0.7

84.3

30.6

Minor 5ss

38.2

-1.3

3.1

42.7

44.7

Minor BPS

57.3

0.23

1.5

61.38

38.4

Associated Gene:

Gene:

PDXDC1

Ensembl Gene ID:

ENSAPLG00000005252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019568

9644859 - 9656191

11333

ENSAPLT00000005464

9640870 - 9666500

25631

ENSAPLT00000035080

9644859 - 9662185

17327