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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9657351_9659471_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9657351 - 9659471

Intron Length:

2121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGACCTGAGCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

TTCTCCTTAGCT

Flanking Amino Acid:

FKFYQKYLNKVAARPSLNFF

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.5

30.7

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

54.1

0.09

1.1

46.9

44.9

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

79.1

0.99

1.5

37.4

Associated Gene:

Gene:

PDXDC1

Ensembl Gene ID:

ENSAPLG00000005252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035080

9644859 - 9662185

17327

ENSAPLT00000005464

9640870 - 9666500

25631