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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9662584_9664412_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9662584 - 9664412

Intron Length:

1829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGTGTT

5'SS Class:

major

3'SS Sequence:

CTCTTTTTATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TATGTAATAATT

Flanking Amino Acid:

TGREIEENSRLLENMTEVVR

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

71.6

38.4

Major BPS

0.75

78.6

Major PPT

79.9

0.67

0.8

81.3

29.1

Minor 5ss

-0.4

3.2

62.7

43.1

Minor BPS

48.5

-0

1.9

70.86

40.1

Associated Gene:

Gene:

PDXDC1

Ensembl Gene ID:

ENSAPLG00000005252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005464

9640870 - 9666500

25631