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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9680561_9681100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9680561 - 9681100

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTGTTCTTATTC

Flanking Amino Acid:

KQLLDGNLRKGLSYLQSLNF

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.5

0.55

75.6

32.9

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

65.8

0.48

1.6

73.37

38.4

Associated Gene:

Gene:

RRN3

Ensembl Gene ID:

ENSAPLG00000004537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004718

9677687 - 9691725

14039