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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9698019_9701998_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9698019 - 9701998

Intron Length:

3980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAACCAGC

5'SS Class:

weak_major

3'SS Sequence:

GCCTCCGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

CACCCCTCAGGT

Flanking Amino Acid:

KEYKPTVCAGGPGRRRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.3

51.3

45.7

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

65.3

0.35

0.9

61.2

35.1

Minor 5ss

48.2

-0.2

2.7

70.5

39.8

Minor BPS

42.9

-0.4

54.78

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047005

9697585 - 9702020

4436