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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9707920_9708012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9707920 - 9708012

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCTG

5'SS Class:

major

3'SS Sequence:

GTTGTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTAAATTATGT

Flanking Amino Acid:

AKVIDKKLPKNWKNVKVLHL

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

57.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.1

0.68

76.9

42.1

Minor 5ss

33.4

-1.9

3.6

47.4

Minor BPS

45.2

-0.2

2.2

71.14

45.1

Associated Gene:

Gene:

RSL1D1

Ensembl Gene ID:

ENSAPLG00000004451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036540

9705093 - 9712128

7036

ENSAPLT00000026134

9705093 - 9713960

8868

ENSAPLT00000024230

9706655 - 9710510

3856

ENSAPLT00000042890

9705093 - 9713199

8107

ENSAPLT00000004581

9705093 - 9710424

5332

ENSAPLT00000036913

9705093 - 9712951

7859