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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9708808_9708948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9708808 - 9708948

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTCTT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCCCTCTACC

Flanking Amino Acid:

HIGKHFYERKKAPLCVNLKA

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

75.5

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.6

0.96

0.5

92.8

16.9

Minor 5ss

40.5

-1.1

3.4

58.6

40.3

Minor BPS

61.3

0.34

1.9

77.24

38.3

Associated Gene:

Gene:

RSL1D1

Ensembl Gene ID:

ENSAPLG00000004451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026134

9705093 - 9713960

8868

ENSAPLT00000024230

9706655 - 9710510

3856

ENSAPLT00000042890

9705093 - 9713199

8107

ENSAPLT00000004581

9705093 - 9710424

5332

ENSAPLT00000036913

9705093 - 9712951

7859

ENSAPLT00000036540

9705093 - 9712128

7036