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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9710352_9713196_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9710352 - 9713196

Intron Length:

2845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGGTCCTA

5'SS Class:

weak_major

3'SS Sequence:

GTACCGCGGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACGGCAA

U12 Branch Point Sequence:

CAAAGCTCCACC

Flanking Amino Acid:

WPAGAVGVWLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.1

48.7

43.6

Major BPS

41.8

-0.5

1.3

39.5

Major PPT

42.2

-0.4

1.7

38.8

39.9

Minor 5ss

34.2

-1.8

3.4

38.2

46.8

Minor BPS

39.4

-0.8

2.2

45.37

42.6

Associated Gene:

Gene:

RSL1D1

Ensembl Gene ID:

ENSAPLG00000004451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042890

9705093 - 9713199

8107