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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9801201_9809692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9801201 - 9809692

Intron Length:

8492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTATTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATTT

Flanking Amino Acid:

MLRREGQTVEVLPNIWSTDG

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.4

0.82

0.7

85.8

27.2

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

59.2

0.37

1.5

72.97

39.1

Associated Gene:

Gene:

SNX29

Ensembl Gene ID:

ENSAPLG00000004050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004166

9764686 - 9888076

123391