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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9824437_9841382_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9824437 - 9841382

Intron Length:

16946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

ATTTTCTTACAT

Flanking Amino Acid:

KAANAFHVYQVYIRIKDDEW

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

86.1

0.81

0.8

80.9

36.4

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

65.6

0.57

1.7

83.22

37.6

Associated Gene:

Gene:

SNX29

Ensembl Gene ID:

ENSAPLG00000004050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004166

9764686 - 9888076

123391