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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9841524_9858442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9841524 - 9858442

Intron Length:

16919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTTTTTATTT

Flanking Amino Acid:

FPPKKAIGNKDAKFVEERRK

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

85.1

25.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.2

0.9

0.6

89.7

25.5

Minor 5ss

35.1

-1.7

2.7

42.4

44.3

Minor BPS

57.4

0.31

1.6

70.13

42.3

Associated Gene:

Gene:

SNX29

Ensembl Gene ID:

ENSAPLG00000004050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004166

9764686 - 9888076

123391