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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9858583_9887946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9858583 - 9887946

Intron Length:

29364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

CTTTTCTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

AACTAGTTACTT

Flanking Amino Acid:

ETLIQLMPFFVDIPPSGEPV

Intron Amino Acid Position:

697

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

78.2

36.4

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

83.1

0.74

0.7

31.7

Minor 5ss

42.3

-0.9

2.8

55.7

41.6

Minor BPS

43.2

-0.4

2.3

60.04

43.7

Associated Gene:

Gene:

SNX29

Ensembl Gene ID:

ENSAPLG00000004050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004166

9764686 - 9888076

123391