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Intron Name: Anas_platyrhynchos_platyrhynchos_15_9959200_9978543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9959200 - 9978543

Intron Length:

19344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

TAAACGATAAAA

Flanking Amino Acid:

LCGDLIHGMPGSQWRKDQER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

78.9

0.65

0.8

73.2

37.4

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

43.5

-0.4

2.3

57.13

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004134

9940505 - 9980512

40008

ENSAPLT00000033794

9940505 - 9982547

42043

ENSAPLT00000030114

9940505 - 9982936

42432

ENSAPLT00000022842

9940505 - 9983313

42809