Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10182552_10184592_F

Intron Information:

Intron Rank:

133521

Intron Class:

major

Intron Phase:

Intron Coordinates:

10182552 - 10184592

Intron Length:

2041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

CTGGTTATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

AGTTTCTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.59

69.8

40.3

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

69.1

0.68

1.6

82.73

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029094

10181819 - 10184893

3075