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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1048089_1051704_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1048089 - 1051704

Intron Length:

3616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTTATTAATA

Flanking Amino Acid:

IGWMSNHTDFGNINGCQLNY

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

85.8

25.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.76

0.8

77.2

36.8

Minor 5ss

-0.9

2.9

43.6

Minor BPS

69.2

0.6

1.5

77.45

32.8

Associated Gene:

Gene:

SLC15A4

Ensembl Gene ID:

ENSAPLG00000011741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045774

1046702 - 1073101

26400

ENSAPLT00000012261

1047790 - 1073101

25312