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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10598704_10599778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10598704 - 10599778

Intron Length:

1075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CTCTCCACCATC

Flanking Amino Acid:

GMCDQITFPLGQAGFPVYKY

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

85.1

0.79

0.7

77.2

31.5

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

43.5

-0.5

2.1

54.96

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008242

10590478 - 10600898

10421