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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10647685_10648266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10647685 - 10648266

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GGTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

AGGTCTCTCACT

Flanking Amino Acid:

EQQRSTQTFQIPLVPLSPAL

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

71.2

0.53

37.5

Major PPT

80.1

0.68

0.9

73.4

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

48.1

-0

2.1

67.61

43.2

Associated Gene:

Gene:

SLC7A4

Ensembl Gene ID:

ENSAPLG00000008442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036486

10644442 - 10648626

4185

ENSAPLT00000008770

10644442 - 10649085

4644