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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10676898_10677634_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10676898 - 10677634

Intron Length:
737

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGA|GTAAGTAGG

5'SS Class:
major

3'SS Sequence:
TCGCACCTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCGCAC

U12 Branch Point Sequence:
TCCTACTGCATT

Flanking Amino Acid:
AGRTIRKRDVELFVRHGKTG

Intron Amino Acid Position:
586

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75
0.59
1.1
66.4
45.1

Major BPS
60.1
0.25
1.4
71.3
36.7

Major PPT
69.8
0.45
0.9
66.2
35.5

Minor 5ss
36.4
-1.5
2.7
39
40.1

Minor BPS
46.4
-0.2
2.1
65.26
45.5

Associated Gene:

Gene:
AIFM3

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10673605 - 10706535
32931

10673605 - 10706535
32931