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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10685044_10686503_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10685044 - 10686503

Intron Length:
1460

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGACCTTG

5'SS Class:
major

3'SS Sequence:
GCTGTCCCCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTGAT

U12 Branch Point Sequence:
CTGTCCCCACAG

Flanking Amino Acid:
GERVGRAVMKMFENHRVKFY

Intron Amino Acid Position:
383

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.1
0.52
1.2
65.8
42.7

Major BPS
68.9
0.47
1.2
60.7
45.9

Major PPT
69.1
0.43
0.9
61.3
35.2

Minor 5ss
47.6
-0.2
2.8
64.1
47.4

Minor BPS
40.1
-0.8
2.1
45.45
46.4

Associated Gene:

Gene:
AIFM3

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10673605 - 10706535
32931

10673605 - 10706535
32931

10673605 - 10706535
32931