Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10692582_10693383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10692582 - 10693383

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGATT

5'SS Class:

major

3'SS Sequence:

CCTTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

GACCACCTAATG

Flanking Amino Acid:

SSTNVLIIGAGAAGLVCAET

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

77.1

37.5

Major BPS

73.1

0.57

71.9

31.3

Major PPT

85.1

0.79

0.6

84.1

23.9

Minor 5ss

44.4

-0.6

3.2

66.1

45.1

Minor BPS

44.2

-0.5

1.8

44.96

40.6

Associated Gene:

Gene:

AIFM3

Ensembl Gene ID:

ENSAPLG00000009646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042808

10673605 - 10706535

32931

ENSAPLT00000030875

10673605 - 10706535

32931

ENSAPLT00000010064

10673605 - 10706535

32931