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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10694410_10694882_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10694410 - 10694882

Intron Length:
473

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGAACC

5'SS Class:
strong_major

3'SS Sequence:
TTGTCACCCTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTCAC

U12 Branch Point Sequence:
TGTCCTGCAAAC

Flanking Amino Acid:
PGLDSLPRFQVKIEKEKVYI

Intron Amino Acid Position:
156

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.4
0.88
0.8
77.7
30.1

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
74
0.54
0.9
70.9
34.9

Minor 5ss
29.3
-2.4
2.8
35.3
40.9

Minor BPS
44
-0.4
2.2
58.31
40.2

Associated Gene:

Gene:
AIFM3

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10673605 - 10706535
32931

10673605 - 10706535
32931

10673605 - 10706535
32931