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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10727254_10727652_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10727254 - 10727652

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TACTTGTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

CGTCTCTTACTT

Flanking Amino Acid:

PNIILTNRLQPSAIVDEATC

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

77.5

32.9

Major BPS

69.2

0.48

37.1

Major PPT

78.4

0.64

0.9

69.5

41.4

Minor 5ss

29.2

-2.4

2.9

35.3

41.5

Minor BPS

0.23

1.6

69.3

42.1

Associated Gene:

Gene:

POLE

Ensembl Gene ID:

ENSAPLG00000009950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021339

10717508 - 10744851

27344

ENSAPLT00000010455

10717508 - 10744851

27344