Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10727756_10727845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10727756 - 10727845

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CCTTCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

CTCCCCTGGAAA

Flanking Amino Acid:

RMTWQWRGEFMPASRSEYHR

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

85.5

0.8

0.7

25.3

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

48.6

-0.1

1.7

57.84

41.3

Associated Gene:

Gene:

POLE

Ensembl Gene ID:

ENSAPLG00000009950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021339

10717508 - 10744851

27344

ENSAPLT00000010455

10717508 - 10744851

27344