Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10730584_10731195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10730584 - 10731195

Intron Length:

612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAG

U12 Branch Point Sequence:

GTTGAGTGAAGC

Flanking Amino Acid:

PGAMLNILVKEGFTNDQYQE

Intron Amino Acid Position:

904

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

86.9

30.1

Major BPS

57.3

0.18

1.6

57.1

49.4

Major PPT

0.45

61.2

40.3

Minor 5ss

34.7

-1.7

3.1

49.5

46.7

Minor BPS

39.3

-0.8

2.4

52.78

44.3

Associated Gene:

Gene:

POLE

Ensembl Gene ID:

ENSAPLG00000009950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021339

10717508 - 10744851

27344

ENSAPLT00000010455

10717508 - 10744851

27344