Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10733850_10734052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10733850 - 10734052

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTTGA

5'SS Class:

major

3'SS Sequence:

GCCCTGCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTTTTTCACT

Flanking Amino Acid:

PSLQDFNIRAILDWDYYIER

Intron Amino Acid Position:

1128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

65.2

37.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

72.1

0.5

0.9

64.5

36.5

Minor 5ss

36.3

-1.6

2.9

45.7

43.5

Minor BPS

72.2

0.78

1.7

90.89

33.1

Associated Gene:

Gene:

POLE

Ensembl Gene ID:

ENSAPLG00000009950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021339

10717508 - 10744851

27344

ENSAPLT00000010455

10717508 - 10744851

27344