Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10734134_10734226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10734134 - 10734226

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGAG

5'SS Class:

major

3'SS Sequence:

GGATTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

AACTCTGTAATT

Flanking Amino Acid:

IITIPAALQQVKNPVPRVRH

Intron Amino Acid Position:

1155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

57.4

41.7

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

70.8

0.47

44.2

Minor 5ss

26.8

-2.7

3.7

36.9

47.7

Minor BPS

54.4

0.22

70.85

40.9

Associated Gene:

Gene:

POLE

Ensembl Gene ID:

ENSAPLG00000009950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021339

10717508 - 10744851

27344

ENSAPLT00000010455

10717508 - 10744851

27344