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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10737865_10737950_F


Intron Information:

Intron Rank:
34

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10737865 - 10737950

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGCCC

5'SS Class:
strong_major

3'SS Sequence:
TCTGTGTCCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAC

U12 Branch Point Sequence:
CACTGCTGACGG

Flanking Amino Acid:
SLAQFTYLEPGSIRHIYLYH

Intron Amino Acid Position:
1485

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.6
0.89
0.9
71.3
37.2

Major BPS
66.3
0.4
1.1
57
41.8

Major PPT
69.8
0.45
0.9
61.8
40

Minor 5ss
32
-2.1
3.3
42.6
44.4

Minor BPS
37
-1.1
2.2
36.45
45.4

Associated Gene:

Gene:
POLE

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10717508 - 10744851
27344

10717508 - 10744851
27344