Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10738058_10738190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10738058 - 10738190

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGGG

5'SS Class:

major

3'SS Sequence:

GCCTTGGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

GTCTCTTTGACC

Flanking Amino Acid:

RKAAVFVLDTVRSNQMPNLT

Intron Amino Acid Position:

1521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

61.1

43.9

Major BPS

74.1

0.6

66.7

39.9

Major PPT

63.3

0.3

1.1

56.5

43.4

Minor 5ss

30.3

-2.3

3.3

39.2

Minor BPS

72.5

0.69

1.2

74.22

36.9

Associated Gene:

Gene:

POLE

Ensembl Gene ID:

ENSAPLG00000009950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021339

10717508 - 10744851

27344

ENSAPLT00000010455

10717508 - 10744851

27344