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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10738368_10738755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10738368 - 10738755

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTGCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGACAT

U12 Branch Point Sequence:

TTCTTTTGCACA

Flanking Amino Acid:

AIQRLLLGYKDERRGPTLIA

Intron Amino Acid Position:

1580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

47.5

-0.1

1.3

52.5

43.3

Major PPT

82.2

0.72

0.8

79.1

32.9

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

49.8

-0

1.9

40.1

Associated Gene:

Gene:

POLE

Ensembl Gene ID:

ENSAPLG00000009950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021339

10717508 - 10744851

27344

ENSAPLT00000010455

10717508 - 10744851

27344